NMD-VCell Research Workbench Module: Evidence Atlas · evidence-to-experiment workflow NMD = neuromuscular disorders
v1.0 candidate Frozen 25 Jul 2026 DOI pending
v1.0.0-database-resource Schema 1.1 Model ridge-safe-v2.3 Benchmark repeated-fold-v2.2 Build EA-20260729-15 v1.0 is a database and evidence-governance release; it is not a validated disease-prediction or clinical decision-support release.
Current evidence ceiling L2 observed HepG2 limited L3a context No independent DMD perturbation validation Open boundary

Explore genes

17,921 stable, server-rendered core records

Every Atlas gene now has a durable /resource/gene/{symbol} route that renders its identifiers, current evidence state, DMD context and decision-blocking gap without client-side JavaScript. The table below opens with 20 representative records from the 123-record detailed-audit subset; filtering can reveal the rest without turning the page into a ledger.

Stable core pages
17,921

Server-rendered and machine-resolvable.

Detailed audit pages
123

Extended source tables and provenance.

DMD-context rows
17,919

GARS1 and NEFL have no usable reconciled DMD-context row.

Denominator reconciliation. 17,921 is the Atlas identifier universe; 17,919 genes have at least one usable DMD-context row after frozen reconciliation. Inspect the typed record.

Detailed subset

Current evidence and action fields

Showing the first 20 rows by default.

Alphabetical detailed-audit subset; no score or rank is generated
GeneActionEvidenceDMD stateMain gap
ACTA1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
ADAM10 Computational replication L2 observed same context perturbation conflicted
GAP-07
Independent computational replication is absentMuscle 3.116 TPM · Assessed · no current hit
ADAMDEC1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
ADCYAP1 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
AIF1 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
APOA1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
APOD Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
BANK1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CACNA2D3 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CALR Computational replication L2 observed same context perturbation conflicted
GAP-07
Independent computational replication is absentMuscle 88.631 TPM · Assessed · no current hit
CCK Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CCN3 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CCSER1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CD83 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CDH20 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CERS4 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CFD Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CHI3L1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CHIT1 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
COL10A1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
COMP Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CPAMD8 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CPEB1 Verify expression L2 observed same context perturbation conflicted
GAP-06
Expression feasibility is not verified in the intended modelMuscle 0.731 TPM · Not assessed
CPNE5 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CTHRC1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CTNNAL1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
CYSLTR2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
DCN Inspect bounded evidence L1 resource record consistent down
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
DDX19B Computational replication L2 observed same context perturbation conflicted
GAP-07
Independent computational replication is absentMuscle 7.229 TPM · Assessed · no current hit
DKK3 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
DLK1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
DNAAF3 Verify expression L2 observed same context perturbation consistent up
GAP-06
Expression feasibility is not verified in the intended modelMuscle 0.076 TPM · Not assessed
DNM1 Computational replication L2 observed same context perturbation conflicted
GAP-07
Independent computational replication is absentMuscle 1.4 TPM · Not assessed
ECM1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
EFNA5 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
EHMT2 Computational replication L2 observed same context perturbation conflicted
GAP-07
Independent computational replication is absentMuscle 6.406 TPM · Not assessed
EMB Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
EPB41L1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
EPS8L1 Verify expression L2 observed same context perturbation consistent up
GAP-06
Expression feasibility is not verified in the intended modelMuscle 0.236 TPM · Not assessed
ESRRG Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
FABP3 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
FBN3 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
FCER2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
FHDC1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
FMN1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
FMO1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
FST Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
GABRG3 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
GAS2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
GFOD2 Provisional hold · external report not yet audited L2 observed same context perturbation conflicted
GAP-09
External quantitative evidence has not been imported and auditedMuscle 2.947 TPM · Not assessed
GFPT2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
GFRA1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
GPX3 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
GRID2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
GRM1 Inspect bounded evidence L1 resource record consistent down
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
GRP Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
HIF3A Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
IL33 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
IL3RA Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
INTS13 Risk/context review L2 observed same context perturbation consistent up
GAP-08
Safety and dependency context blocks escalationMuscle 10.991 TPM · Not assessed
KCNT2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
KCTD8 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
LMO2 Computational replication L2 observed same context perturbation conflicted
GAP-07
Independent computational replication is absentMuscle 15.237 TPM · Not assessed
LPL Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
LST1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
LTBP1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MAL Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MEST Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MLXIPL Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MMP27 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MON1A Muscle-context assay L2 observed same context perturbation conflicted
GAP-02
Independent muscle-context perturbation is absentMuscle 8.057 TPM · Assessed · no current hit
MPHOSPH6 Computational replication L2 observed same context perturbation consistent up
GAP-07
Independent computational replication is absentMuscle 4.946 TPM · Assessed · no current hit
MS4A7 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MSR1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MYL1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MYL2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MYLPF Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MYOC Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
MYOG Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
NAGLU Risk/context review L2 observed same context perturbation conflicted
GAP-08
Safety and dependency context blocks escalationMuscle 8.664 TPM · Assessed · no current hit
NAV3 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
NCAM1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
NOX5 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
OPN1SW Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PADI2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PAK1 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PCDH11X Inspect bounded evidence L1 resource record consistent down
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PCDH15 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PF4V1 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PLA2G2A Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PLVAP Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PLXDC1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PRPH2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PRSS23 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
PTGER3 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
RAC3 Risk/context review L2 observed same context perturbation conflicted
GAP-08
Safety and dependency context blocks escalationMuscle 0.339 TPM · Not assessed
RCN1 Inspect bounded evidence L1 resource record consistent up
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
RGCC Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
RGS17 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
RGS4 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
RGS7BP Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
RNASEH2C Risk/context review L2 observed same context perturbation consistent up
GAP-08
Safety and dependency context blocks escalationMuscle 9.526 TPM · Assessed · no current hit
RNF8 Risk/context review L2 observed same context perturbation conflicted
GAP-08
Safety and dependency context blocks escalationMuscle 4.105 TPM · Not assessed
RPS15A Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
SEMA3E Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
SERPINA3 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
SLC26A7 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
SLN Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
SPON1 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
STMN2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
TLR4 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
TMEM178B Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
TNC Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
TNNC2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
TRIM67 Inspect bounded evidence L1 resource record consistent down
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
TSPAN8 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
VIPR2 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
WDR4 Risk/context review L2 observed same context perturbation consistent up
GAP-08
Safety and dependency context blocks escalationMuscle 4.159 TPM · Assessed · no current hit
WDR5B Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
ZBTB16 Inspect bounded evidence L1 resource record conflicted
GAP-01
Direct target-level perturbation evidence is absentMuscle context not available · Not assessed
ZFP69B Verify expression L2 observed same context perturbation conflicted
GAP-06
Expression feasibility is not verified in the intended modelMuscle 0.155 TPM · Not assessed
ZNF133 Muscle-context assay L2 observed same context perturbation conflicted
GAP-02
Independent muscle-context perturbation is absentMuscle 4.558 TPM · Assessed · no current hit
ZNF236 Risk/context review L2 observed same context perturbation conflicted
GAP-08
Safety and dependency context blocks escalationMuscle 2.007 TPM · Not assessed

Compact badges intentionally replace repeated long phrases. Hover/focus the linked gene record for complete definitions, identifiers, provenance and audit tables.