section layer object_id path filename size_bytes sha256 current_doi_deposit_object note current_required_archive analysis_core FILE:CORE:v0.8.1:v24r1:20260722 downloads/nmd_vcell_database_resource_v0.8.1-v24r1-20260722.tar.gz nmd_vcell_database_resource_v0.8.1-v24r1-20260722.tar.gz 9677910 b88a3b9f1ae44b48d6ea3c2a568626229cc93f94d539b8ea30f55534aae41f36 true required two-layer database-v1 deposit candidate object current_required_archive evidence_atlas_overlay FILE:OVERLAY:v1.0.0-database-resource:stage5.69:20260729 downloads/nmd_vcell_research_workbench_overlay_v1.0.0_database_resource_20260729_stage5_69.tar.gz nmd_vcell_research_workbench_overlay_v1.0.0_database_resource_20260729_stage5_69.tar.gz 2703227 95299f65c0e4993f9c83b9b10f1bedc15f0e0cc9f2d3b75bd3433793072fcd49 true required two-layer database-v1 deposit candidate object external_gate_inputs api/v1.1/v1_external_authorization_dossier.json v1_external_authorization_dossier.json 3177 30422e4876a8feca9b9e342838bced70cae38e3f2c3730ab7ace4d3773025c7d supporting external_gate_inputs external_gate_inputs downloads/v1_authorization_checklist.tsv v1_authorization_checklist.tsv 721 6eac20a65aa3dad6bc73c273c04ba5ee9c64ac6ab5f3c1beb5f6d9b41010a0b7 supporting external_gate_inputs external_gate_inputs downloads/v1_licence_maintainer_metadata_template.tsv v1_licence_maintainer_metadata_template.tsv 1106 9e79e3997b7b8bc1ecfdfdbb1c03f5f423efc920195d551a7e1fadfcea555b32 supporting external_gate_inputs external_gate_inputs downloads/v1_external_gate_input_template.json v1_external_gate_input_template.json 1583 68503ce89757fb726d1ae26dd638cee18516899f7e163624a21e6afef83237c6 supporting external_gate_inputs external_gate_inputs downloads/validate_v1_external_gates.py validate_v1_external_gates.py 8030 dc27943479f181ac09a2bff34b6ff589512fe98f4d380779aaa7568753122983 supporting external_gate_inputs human_readable_docs downloads/DATABASE_PAPER_READINESS.md DATABASE_PAPER_READINESS.md 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human_readable_docs human_readable_docs downloads/V1_EXTERNAL_GATE_HANDOFF.md V1_EXTERNAL_GATE_HANDOFF.md 1305 36c2080d6a7122ed2f6a883b20ac1b2972d990c52bc40ef526dccc5680aacf10 supporting human_readable_docs human_readable_docs downloads/DEPRECATED_ARCHIVES.md DEPRECATED_ARCHIVES.md 1663 a61adb8685ad6f726711c3807e4c8cd82d06d010e57fc94b5630d9faf2efc15d supporting human_readable_docs human_readable_docs downloads/STATIC_PREVIEW_AND_ROUTE_POLICY.md STATIC_PREVIEW_AND_ROUTE_POLICY.md 741 3efc44384525269334cadc5768bc0fe129ea6a02a592c0dd2d8967c2fd6b44f9 supporting human_readable_docs human_readable_docs downloads/SITE_QUALITY_STATUS.md SITE_QUALITY_STATUS.md 581 22221e0f763385f3c95186687b9622126a93751dbff8b914117983af0835449f supporting human_readable_docs human_readable_docs reviewer-quickstart.html reviewer-quickstart.html 14694 050901b7e0c0a8a5738068ebb13023ffad15dfe3f65fb43b456a6a6a40803aaa supporting human_readable_docs human_readable_docs api/v1.1/reviewer_entrypoints.json reviewer_entrypoints.json 3846 fdf262da9a3b904c396ca4d1448df9fb755bad8fbab527e2f0f7d9492ce620f5 supporting human_readable_docs human_readable_docs downloads/REVIEWER_QUICKSTART.md REVIEWER_QUICKSTART.md 1932 86c63405f826cc7ff2ab9a0d9e39a7b7abd51009b82f9fc0680c50a1d1cb9158 supporting human_readable_docs human_readable_docs downloads/reviewer_entrypoints.tsv reviewer_entrypoints.tsv 838 815ee230bccf09acab82fcb9d6d3cbcdf789c6485672e2a2feadeda955bb90fb supporting human_readable_docs human_readable_docs downloads/V1_DEPOSIT_QUICK_VIEW.md V1_DEPOSIT_QUICK_VIEW.md 1352 7e9d5e6f37253124de77506696b397a6232168b57ad02fd5d667d046a4833d9c supporting human_readable_docs identity_and_quality api/v1.1/release_manifest.json release_manifest.json 28167 5fbddb8f275462cc235e4bdd0f897db8bebd1a115bcec128b9fd1cea33a0b826 supporting identity_and_quality identity_and_quality api/v1.1/v1_release_gate.json v1_release_gate.json 4689 140997fc8067c6416fc32cc20a50a2b8c3594adb3f2282d4928f30eed11fde50 supporting identity_and_quality identity_and_quality api/v1.1/route_manifest.json route_manifest.json 44169 fd63d200a1c492669f3427cb7fcff70e655191cfeae59aa53c66196b4fb41535 supporting identity_and_quality identity_and_quality api/v1.1/site_quality_status.json site_quality_status.json 1452 6eaa0beef8df6d39ac41df1041a504c7085b0eb51947b0594b0fb2aa5ce4bc6d supporting identity_and_quality locked_prediction_scaffolds api/v1.1/prediction_registry.json prediction_registry.json 2172 c21ef9ec233273f9474f6034cd1033acf2870c22350bcdf11f8a07ed1b3ab401 supporting locked_prediction_scaffolds schema_and_api api/v1.1/openapi.json openapi.json 119841 4120581d1935cfe904e10fd417e78ee717077681d00fe63f297a7178bf359674 supporting schema_and_api schema_and_api api/v1.3/research-objects/registry.json registry.json 14217 a1e491410a6a39bd9494cd4ebf9afc80856c88b831f845c705ad23cc96531105 supporting schema_and_api schema_and_api downloads/nmd_vcell_data_dictionary_schema_1.1.tsv nmd_vcell_data_dictionary_schema_1.1.tsv 66949 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supporting_public_object downloads/v1_release_handoff_checklist.tsv v1_release_handoff_checklist.tsv 1333 b616859a41726f4b9e0c91915ad2f55e7dc92ce967c2da3d49c71ca3681f8026 supporting supporting_public_object supporting_public_object api/v1.1/deprecated_archive_exception_registry.json deprecated_archive_exception_registry.json 2228 e1b0eacf0c2a8dcbf3558166b36e92b72808c5d5462dd931b648637d8da44f53 supporting supporting_public_object supporting_public_object downloads/deprecated_archive_exception_registry.tsv deprecated_archive_exception_registry.tsv 3860 780877cdf81c5116ee15a6164acb1007f5dd09c0a9fc2d4fd7a54adcc5e578b3 supporting supporting_public_object supporting_public_object qa-status.html qa-status.html 11533 a6bbce73e0f2d0cc0ec24cbb7ffc06ac4125bca4ed421308628480615970f659 supporting supporting_public_object supporting_public_object sitemap.xml sitemap.xml 10999 83aafe2c70a0dfbd12d2becbf1277e1ad34ebe3018b095ccef26fb5c1f959c7f supporting supporting_public_object supporting_public_object api/v1.1/site_index.json site_index.json 13546 bcaffe3623243d0dbace42992b2fef485c591e9095f6894b369a57b8739f7422 supporting supporting_public_object supporting_public_object v1-deposit.html v1-deposit.html 11050 65eba465d93c8e109ff0a5fe908cffe85cb4fd6ad006678eef154527b1673375 supporting supporting_public_object supporting_public_object api/v1.1/v1_deposit_quick_view.json v1_deposit_quick_view.json 11888 21f0fb97e4721c7a7c94f9d6b19e6ae0df2f987e811375dc13e71f3461c95b42 supporting supporting_public_object supporting_public_object downloads/v1_deposit_quick_view.tsv v1_deposit_quick_view.tsv 8706 330f40a7458240b1d99beb4d6606c01a6b5a7ddd5d7f808680b11d42c30e8d4a supporting supporting_public_object