task_id	state	deliverable	external_dependency
U01	DONE	site_source_reconciliation.json	
U02	PROVIDER_RECEIPT_PENDING	release_snapshot.json; post-deploy receipt schema ready	Sites save/deployment result
U03	DONE	shared query contract and URL-over-storage Planner restore	
U04	DONE	MULTI_ARM_PANEL with separately resolved arms	
U05	DONE	versioned full StudyDraft share reconstruction	
U06	DONE	nmd-vcell-research-question/2.0 canonicalization and Q2 identity	
U07	DONE	publication_package_registry.json; 6 main + 31 supplementary figures	
U08	DONE	public_data_projection.json with controlled-record collapse	
U09	TECHNICAL_ACCEPTANCE_READY	browser and deployed-route suites	production/private-window and independent-user execution
U10	DONE	current_entity_graph.json and normalized SQLite	
U11	DONE	622/622 descriptions plus semantic dictionary v1.2	
U12	DONE	49 dataset-version × task-contract decisions	
U13	DONE_BOUNDED_REFERENCE_CONTEXT	GSE288958 source integrity, object reconciliation, read-only QC, donor-wise Scrublet and independent annotation-disagreement audit; ambient RNA and author-exact reprocessing retained as optional enhancement gates	
U14	DONE_BOUNDED_ROLE	GSE293514 denominators reconciled; cell-level role closed for current release	
U15	DONE	GSE272233 replicate-aware and GSE277637 line-aware reruns	
U16	DONE	Target 360 source effects and ZNF133/PGAM5/ADAM10 examples	
U17	DONE	typed cell/process/trajectory source and time contract	
U18	DONE_6_OF_6_PRIORITY_CLASSES	seven registered reusable views cover all six priority classes with SVG/PNG/source TSV	
U19	DONE	benchmark_task_registry_v2.json	
U20	DONE	4 capability lanes bound to ModelRuns and outcome gates	
U21	EXTERNAL_INPUT_READY	P48/P49 checksummed appointment, license, identity and partition handoff	five real appointments and six separation constraints
U22	BLOCKED_BY_GOVERNED_GATE	scoring contract frozen; target access remains false	U21 plus sealed source-only predictions and one-time authorization
U23	EXTERNAL_INPUT_READY	ADAM10 v08.7/v08.8 execution packet and endpoint/QC/variance intake	wet-lab Stage A measurements
U24	EXTERNAL_INPUT_READY	480×20,000 operating-characteristic grid and formal parameter-lock workbench	measured variance/ICC/effect/margin and named approvals
U25	DONE_TEST_ONLY	three hash-chained Study→Prediction→Outcome fixtures; production 0/0/0	
U26	DONE_CANDIDATE	support-aware v12.40 candidate package; formal release remains HOLD	publication owner release decision
U27	DONE	shared browser research domain and common generated objects	
U28	DONE	ordered deterministic build and scientific/UI identity separation	
U29	DONE	current normalized SQLite with foreign keys; historical SQL retained	
U30	DONE	scientific_release_diff.json	
U31	DONE	source-constrained Search/Ask policy, ambiguity and abstention	
U32	EXTERNAL_INPUT_READY	five-task protocol and blank metric/observation sheets	5–8 independent users
U33	DONE	four disease-specific task contracts and two spatial eligibility/sensitivity contracts	
U34	TECHNICAL_REPRODUCTION_READY	clean-room 3-query/1-result validator and immutable database	DOI, final license and named maintainer approvals
U35	EXTERNAL_INPUT_READY	append-only outcome ingestion template accepts positive/null/negative/QC outcomes	first governed real outcome from U22 or U24