file	status	path	size_bytes	sha256	source_path
00_repeated_balanced_crossfit_protocol_20260717.md	present	downloads/00_repeated_balanced_crossfit_protocol_20260717.md	6177	b91c2c357e4b76e80757cfb618eb258762b9938f98575a5ef91b2dd9d0772505	local_post416i_candidate
01_repeated_balanced_seed_manifest.tsv	present	downloads/01_repeated_balanced_seed_manifest.tsv	1578	4c617b6945e8e2a614f3af3862b9203b997e4816da529e97f53c416210543f16	local_post416i_candidate
02_reproduction_tolerance_debug_log_20260717.md	present	downloads/02_reproduction_tolerance_debug_log_20260717.md	1966	172d6be575f1984f55cbe69144087ce97e79e7093eac41369e84a1f02d6312a6	local_post416i_candidate
34_major_revision_response_matrix_20260716.md	present	downloads/34_major_revision_response_matrix_20260716.md	8098	42ef5c20415849239693c566e3d58accf8fe3e3f50d6dc0b81e49f8c4f4e471c	local_post416i_candidate
35_claim_ladder_and_scientific_identity_20260716.md	present	downloads/35_claim_ladder_and_scientific_identity_20260716.md	2948	c75f4487bec05e8b36c5a35b73852f92399c5621cfa0e04e320596dde44adf64	local_post416i_candidate
36_analysis_chronology_and_freeze_protocol_20260716.md	present	downloads/36_analysis_chronology_and_freeze_protocol_20260716.md	2998	49c7c6fd0c9322ee79f346511fd84461a184d24c635a3a33f8b4f9748d916a03	local_post416i_candidate
37_feature_leakage_ledger.tsv	present	downloads/37_feature_leakage_ledger.tsv	3309	758ddf66e611eebba56face6d1448770c65aa9aa8eb3b498d2bdee109ef239f2	local_post416i_candidate
38_model_cards_20260716.md	present	downloads/38_model_cards_20260716.md	5958	2a83cef61f5bd4ae10423c716884515b4f6ffac002941d2b51cde063e552cc44	local_post416i_candidate
39_resource_audit_comparison.tsv	present	downloads/39_resource_audit_comparison.tsv	2912	ac946a69d957bcf2b9f87e4aa7b10df1f5828b1248940d667450a706745ab612	local_post416i_candidate
40_reproducibility_levels_manifest.tsv	present	downloads/40_reproducibility_levels_manifest.tsv	2176	0ce92a75fcb34d976c3149a3224476dc3f0cbb66a981b40542294134ac5aaf4a	local_post416i_candidate
41_lockbox_noise_ceiling_protocol_20260716.md	present	downloads/41_lockbox_noise_ceiling_protocol_20260716.md	2148	2b4cadaf9ab7de37de0b049c9fc0ce444f7adf5f811ae8803821513161cb1459	local_post416i_candidate
42_user_task_evaluation_protocol_20260716.md	present	downloads/42_user_task_evaluation_protocol_20260716.md	2053	cbc828c47f92a78bc5d3a24fdc5482ef9bcfe670901a44ed60019ebae4e08350	local_post416i_candidate
52_v21_evidence_aligned_figure_caption_package_20260717.md	present	downloads/52_v21_evidence_aligned_figure_caption_package_20260717.md	14827	8bd348cbeb5154c64653c2ba489f0ab795e78faee261200235523454f1635ac8	local_post416i_candidate
54_v21_focused_peer_review_20260717.md	present	downloads/54_v21_focused_peer_review_20260717.md	7801	901ecf618a1d060f589c74e35c1f53efd4c3cb29df8f70705afed1cc0ae606ef	local_post416i_candidate
55_v21_primary_model_card_addendum_20260717.md	present	downloads/55_v21_primary_model_card_addendum_20260717.md	4978	544860098f1ac7d5bf0e6cc65f07764375edd905e257468f09a67fc8d082c925	local_post416i_candidate
57_v22_repeated_balanced_crossfit_status_20260717.md	present	downloads/57_v22_repeated_balanced_crossfit_status_20260717.md	4190	8bae417619fdf1e1d5184519a2988fb363231757302466d96b68c614e07c5f92	local_post416i_candidate
58_v22_fold_stability_model_card_addendum_20260717.md	present	downloads/58_v22_fold_stability_model_card_addendum_20260717.md	2784	ac5c01841397f47fb2d23d61f296650807d56b6851815f14a49c959f5826072b	local_post416i_candidate
FEATURE_ABLATION_LEAKAGE_AUDIT_REPORT.md	present	downloads/FEATURE_ABLATION_LEAKAGE_AUDIT_REPORT.md	19215	163819960daf81d1027527fee3ce9ca680f79c86c8a85c3211b1b8c06abfc82f	local_post416i_candidate
GEARS_FROZEN_SPLIT_BENCHMARK_REPORT.md	present	downloads/GEARS_FROZEN_SPLIT_BENCHMARK_REPORT.md	4484	c21c5528ded9595e29274b3a9e64350ed3bb980098ea267bd3a057952e0ff87a	local_post416i_candidate
GSE293514_MUSCLE_FUSION_EXTERNAL_VALIDATION.md	present	downloads/GSE293514_MUSCLE_FUSION_EXTERNAL_VALIDATION.md	8285	674f32ee97a9b0efe649b20837cd67c93bb350598fc8a9c033f019c4109e98bf	local_post416i_candidate
H1_H2_INDEPENDENT_VERIFICATION.md	present	downloads/H1_H2_INDEPENDENT_VERIFICATION.md	244	6ec29bf4b5aa8179669efc93ae02357fd8dac9780d07d00251fb6fd5d285f027	local_post416i_candidate
H1_UNIQUE_TARGET_AGGREGATE_REPORT.md	present	downloads/H1_UNIQUE_TARGET_AGGREGATE_REPORT.md	2015	4fefd7a5979da0090d9ff5cb1e4ddac287af6cffbdeff6dea66edab537ddf1ea	local_post416i_candidate
H2_UNIQUE_TARGET_CROSSFIT_REPORT.md	present	downloads/H2_UNIQUE_TARGET_CROSSFIT_REPORT.md	2425	5b904535ae5e3d9c5feea208d31e7b53c0e24f1e2834b23ddee195bb6115781d	local_post416i_candidate
H3_COVERAGE_SELECTION_REPORT.md	present	downloads/H3_COVERAGE_SELECTION_REPORT.md	2551	c7fe829a6fc1c878284f518435edc44b80556b8174c99a7759268070694958ff	local_post416i_candidate
H3_H4_INDEPENDENT_VERIFICATION.md	present	downloads/H3_H4_INDEPENDENT_VERIFICATION.md	333	059ab4bc71317f7a8bfb408037fd26e3453c8ffc7745af110ba89dca331bdec5	local_post416i_candidate
H4_RELIABILITY_STRATIFIED_EFFECT_REPORT.md	present	downloads/H4_RELIABILITY_STRATIFIED_EFFECT_REPORT.md	2786	d087f1bd93e280029dea395119403d71dcd8e169252d54996dfd70743f3bbf1c	local_post416i_candidate
MAJOR_REVISION_RETROSPECTIVE_AUDIT.md	present	downloads/MAJOR_REVISION_RETROSPECTIVE_AUDIT.md	1730	1b70ba1fa027df56c4f0a082d01c8c257a6345301489ac740ea4a7855a5e9559	local_post416i_candidate
NATURE_METHODS_LINEAR_BASELINE_REPORT.md	present	downloads/NATURE_METHODS_LINEAR_BASELINE_REPORT.md	5960	e6ec55bbce22c3e1d28d43b6d394b5c1decbfe3ab96acbcd8b268915ebfed449	local_post416i_candidate
NOISE_CEILING_REPORT.md	present	downloads/NOISE_CEILING_REPORT.md	1318	0205fd56ad6cc92df7cd12ca929f00a49adbf450d0ad21307a2c1e1350b626ce	local_post416i_candidate
PUBLICATION_GRADE_STATISTICAL_AUDIT.md	present	downloads/PUBLICATION_GRADE_STATISTICAL_AUDIT.md	4594	c6bb715941db462bfc3cf8a7fb3c5c75f9fe8819d5b2d37e614950af562e83d2	local_post416i_candidate
REPEATED_BALANCED_CROSSFIT_REPORT.md	present	downloads/REPEATED_BALANCED_CROSSFIT_REPORT.md	2052	95363069dd9a01fea5da29140dc29b7e56c3e879aecb6bf8e07fda7581cf719c	local_post416i_candidate
REPEATED_HELDOUT_GENE_RIDGE_REPORT.md	present	downloads/REPEATED_HELDOUT_GENE_RIDGE_REPORT.md	4023	0e4d301ca3c69b17f35c95ad2e02a2a991ff723f40e43c43c8aef17b70729d28	local_post416i_candidate
REVIEWER_CRITIQUE_UPGRADE_REPORT.md	present	downloads/REVIEWER_CRITIQUE_UPGRADE_REPORT.md	17289	0a0a3f4a8a4cf67266186a47254a06357c974c45c7cf5f6ad8f1c96839ea3bca	local_post416i_candidate
SCGPT_FROZEN_SPLIT_BENCHMARK_REPORT.md	present	downloads/SCGPT_FROZEN_SPLIT_BENCHMARK_REPORT.md	4136	d414819daa3c18bc3b9e2d3ba36cf507b5fb145e4c6176bf6c7cba9d5c3ddd4f	local_post416i_candidate
V24_EVIDENCE_TRANSITION.md	present	downloads/V24_EVIDENCE_TRANSITION.md	648	8abb156a8b34af8427a7d05b18aa86c6cf61e000a7f536220693b0ebc0d457cd	local_post416i_candidate
candidate_evidence_vector_v06.tsv	present	downloads/candidate_evidence_vector_v06.tsv	10732	8dc9ab61686fd38b591ba32451103c8de740d70a3e5b10ed162428c9f5eb2443	local_post416i_candidate
candidate_signature_stability.tsv	present	downloads/candidate_signature_stability.tsv	2873	fa1fc06a4ff63b246cd6155428656272d40584dc245773e0e98321d7b6f79432	local_post416i_candidate
depmap_26q1_leave_hepg2_out_provenance.json	present	downloads/depmap_26q1_leave_hepg2_out_provenance.json	444	9b6cd4ebf3a06069ce77d844f57d2d9171411598f9f5ca735ac155bbd2336b3c	local_post416i_candidate
depmap_leave_hepg2_out_summary.tsv	present	downloads/depmap_leave_hepg2_out_summary.tsv	1398	16303f27a4a84f1aa62202277c47af473558e22ea69402347f0693d52ab1d73c	local_post416i_candidate
depmap_leave_hepg2_out_vs_released.tsv	present	downloads/depmap_leave_hepg2_out_vs_released.tsv	2259	792b49df472ed5636edeafe471f8e1d94be3556dd5038202b629e168b20ab27e	local_post416i_candidate
direct_head_design_sensitivity.tsv	present	downloads/direct_head_design_sensitivity.tsv	2561	6525ef793bc4efe65a9178f5629796d32bddb40c53825c4da6cb90757f27c458	local_post416i_candidate
direct_head_endpoint_effects.tsv	present	downloads/direct_head_endpoint_effects.tsv	2040	8c8770b6db374a23086d159d4e67b17dd2bddc5c9952759b347e8951ac4e7e78	local_post416i_candidate
dmd_multisource_evidence_module_counts.tsv	present	downloads/dmd_multisource_evidence_module_counts.tsv	155	f098f3a6212e00a67ed87f8bd733e35a5d1a39a17bbd198a8b8de08c43c25810	local_post416i_candidate
dmd_multisource_evidence_modules.tsv	present	downloads/dmd_multisource_evidence_modules.tsv	4819058	8b8d963b9c28c4684c700596499e757315074286a8a2f06bc22ffbc09348d6d5	local_post416i_candidate
dmd_signature2_meta_analysis_readiness.tsv	present	downloads/dmd_signature2_meta_analysis_readiness.tsv	858	73465c6d0cdb39fd9f69c341de58fd0b41c18a4a92d8596e9c42377ea5c4a206	local_post416i_candidate
dmd_source_specific_gene_effects.tsv	present	downloads/dmd_source_specific_gene_effects.tsv	7200595	043acb2004911b25f3a0d0fe00a9ef6b16fb252f4793d713e2b252cf63799b9b	local_post416i_candidate
downloads_manifest.tsv	present	downloads/downloads_manifest.tsv	49475	c8f4f7ce853203ca34689b0611ebd1b5531c2eaf532bdb91a06a20731311f3d0	local_post416i_candidate
execution_metadata.json	present	downloads/execution_metadata.json	2364	6f1a8c6ceeccf7a620447e9eed54feb49681ad2078ea317d3da0e1a083eac4c7	local_post416i_candidate
external_context_uncertainty.tsv	present	downloads/external_context_uncertainty.tsv	1417	507d6d0b20f486251bb33f285447dd6021c85feff95b9693b4fa485383fc6fb9	local_post416i_candidate
feature_ablation_cross_seed_summary.tsv	present	downloads/feature_ablation_cross_seed_summary.tsv	2028	5a58b6dde116bab687246a305ca914a010abb2c52f54ae7100f3256fd6c1b53c	local_post416i_candidate
feature_ablation_gates.tsv	present	downloads/feature_ablation_gates.tsv	4042	4c400a7bdc8c7abbaf01f79cb51126d45a3eb1783c789f78cdd364a4afb351dc	local_post416i_candidate
feature_ablation_vs_full_cross_seed.tsv	present	downloads/feature_ablation_vs_full_cross_seed.tsv	3416	f005373b11480084cd249584dabfeebfc359db7ff1cb7947ce09c48750e33ed5	local_post416i_candidate
feature_delta_head_comparison.tsv	present	downloads/feature_delta_head_comparison.tsv	18582	adee8ee620a0ca1352ddd145621c11f1d637ec8d386cd5c1ca6dd5cd0067120c	local_post416i_candidate
feature_delta_paired_tests.tsv	present	downloads/feature_delta_paired_tests.tsv	3234	153cf27eef99fd76b18a4624932ffb8fb7eeb047c1a895351a8524d0389cd664	local_post416i_candidate
feature_delta_strict_gate.tsv	present	downloads/feature_delta_strict_gate.tsv	1038	8ec25caac308882bee40c306d22b3f8d062ca7c4ae5306b54065b96cca233d46	local_post416i_candidate
feature_delta_uncertainty_summary.tsv	present	downloads/feature_delta_uncertainty_summary.tsv	1610	8bed174de67cff299f063bb21d06c57a95c76009d8f8dfe21b99229caef395cf	local_post416i_candidate
figure1_design_update.tsv	present	downloads/figure1_design_update.tsv	177	63219149a8c05c561f7e92318044008c0dd5fcc589e13643d0131b76a5bdbde6	local_post416i_candidate
figure1_evidence_architecture_v21.pdf	present	downloads/figure1_evidence_architecture_v21.pdf	47989	9e1c0ce5797e60839dff7754307033b4cba158a830bae73a4b26fb8b9a6a12a6	local_post416i_candidate
figure3_panel_a_design.tsv	present	downloads/figure3_panel_a_design.tsv	177	63219149a8c05c561f7e92318044008c0dd5fcc589e13643d0131b76a5bdbde6	local_post416i_candidate
figure3_panel_b_primary_effects.tsv	present	downloads/figure3_panel_b_primary_effects.tsv	2945	2ff1a02b14bb1935fed4d4c850bf86f8b99509ec6873719685d573209c8b2438	local_post416i_candidate
figure3_panels_c_d_primary_reliability_strata.tsv	present	downloads/figure3_panels_c_d_primary_reliability_strata.tsv	2919	a32d53df7af7fe8bbaf54963b1696b0f1c562a9ebb7468c624db985ef702307d	local_post416i_candidate
figure3_reliability_trends.tsv	present	downloads/figure3_reliability_trends.tsv	1157	93532ea3fce1b11089eabb401d4c74049bda39af8c0c71242a0c5a56a92b0195	local_post416i_candidate
figure3_unique_target_benchmark_v21.pdf	present	downloads/figure3_unique_target_benchmark_v21.pdf	62260	821bb295ab0530dd8662afe6aab3162b127c361ec7f6596bec5703648c7b2a57	local_post416i_candidate
figure_legends_v21.md	present	downloads/figure_legends_v21.md	3033	9ff395bedbb605e2ea242f24941f6f78e7c0cb38e719b9de63b2400ec18a5477	local_post416i_candidate
figure_validation_report_v21.txt	present	downloads/figure_validation_report_v21.txt	712	20f3c5f51e56aac7a5fc9fdc57cca09f3415d815591273db636bd6a3dfdaedb5	local_post416i_candidate
figure_validation_report_v22.json	present	downloads/figure_validation_report_v22.json	3430	2a5d820de512fa829243c74254cc63a81c897b3facd638fa9f2196e4570e151d	local_post416i_candidate
final_gpu_closure_manifest_20260710.tsv	present	downloads/final_gpu_closure_manifest_20260710.tsv	8753	d62243b7afdcb224ef38097eacba7b8ecadad7d823c39a8dbc11e23127b421e8	local_post416i_candidate
gears_and_ridge_same_coverage_scores.tsv	source_release_only	downloads/gears_and_ridge_same_coverage_scores.tsv	1036183	5830940385b29d32e3b6b23a596dec92cb91bde3d3c751976b650cbcd44901d9	local_post416i_candidate
gears_frozen_split_gates.tsv	present	downloads/gears_frozen_split_gates.tsv	732	60c818c451aafe72f15506f4d1f11f2ef1acead5aa9f813f50b0ce0dd0ae7b75	local_post416i_candidate
gears_frozen_split_paired_tests.tsv	present	downloads/gears_frozen_split_paired_tests.tsv	6500	9bedcfb7f11b7d7cdc1bdb8be7a9257023bda9dae24f671c87a502eac1b0372e	local_post416i_candidate
gears_frozen_split_scores.tsv	source_release_only	downloads/gears_frozen_split_scores.tsv	509698	2234159cacc0b527cc6069cd622bb83c2be731d7a4d260988ebb1eac024382df	local_post416i_candidate
gears_frozen_split_summary.tsv	present	downloads/gears_frozen_split_summary.tsv	2429	d7c16d1032eb27d2bb8943662366e355de6b5da50d6bb52bbb90b7839060aeb2	local_post416i_candidate
gears_vs_ridge_v1.tsv	present	downloads/gears_vs_ridge_v1.tsv	2628	3a31418c95b38ff93405a48931d6dc455dca1ebf201329125d781f87065a54de	local_post416i_candidate
gse293514_candidate_safety_flags.tsv	present	downloads/gse293514_candidate_safety_flags.tsv	32117	7ae2ab3c328ba622a65d76bc733fdbf727d0ba20eaaec508cbfe2ff4f3aa9b61	local_post416i_candidate
gse293514_external_validation_summary.tsv	present	downloads/gse293514_external_validation_summary.tsv	296	4b6b0deb061d9a70be998c73c44511a3a9f76e0353dfb090cd00283d72068560	local_post416i_candidate
gse293514_external_validation_tests.tsv	present	downloads/gse293514_external_validation_tests.tsv	781	b0528c4abdc8707f33495c693b32847468eb62fa05ab0f81b11db70c21d1a6e7	local_post416i_candidate
gtex_v8_muscle_target_coverage.tsv	present	downloads/gtex_v8_muscle_target_coverage.tsv	983	b7b6a7ff21c484faf8151d3c2c8f0e1edf9a4c454f44fdfe72226e49d2301768	local_post416i_candidate
gtex_v8_muscle_target_expression_detail.tsv	present	downloads/gtex_v8_muscle_target_expression_detail.tsv	175672	a16f6bb68239a18aaec7bffa538ab256292477c4921007ab805b87b5b66c5ff4	local_post416i_candidate
gtex_v8_source_metadata.tsv	present	downloads/gtex_v8_source_metadata.tsv	611	3399aa5fd104ca043fcd70d14b4a9491fea33d3d1404a99997d0650ea8f6d2d8	local_post416i_candidate
hepg2_candidate_decision_matrix_feature_delta_mlp_v2_lco.tsv	present	downloads/hepg2_candidate_decision_matrix_feature_delta_mlp_v2_lco.tsv	24345	cae2b107669d8a93f4c4849571ae012dd0162ebb7b1df1794b4b27bb4112f53a	local_post416i_candidate
legacy_v05_download_resolution.tsv	present	downloads/legacy_v05_download_resolution.tsv	18727	6acd75bfc46a88e831396b9dcafef18e488b8856e09d58e4a6238e3c25efb66e	local_post416i_candidate
legacy_v05_input_resolution.tsv	present	downloads/legacy_v05_input_resolution.tsv	17410	10cbaa49e2d7f4e16ce544174c64305dbaa62394b24590ad42c482898956fba4	local_post416i_candidate
linear_pca10_coverage.tsv	present	downloads/linear_pca10_coverage.tsv	523	03152ce6ea2e64d920fdaca0d4a6cc398418a38ab8554677e79926aeeac63617	local_post416i_candidate
linear_pca10_gates.tsv	present	downloads/linear_pca10_gates.tsv	752	40c88aae2ef09b2c3f022c324c5c86b1d0b15b13d745117049a6a300100681ca	local_post416i_candidate
linear_pca10_paired_tests.tsv	present	downloads/linear_pca10_paired_tests.tsv	6890	75364f2aaf256856f5ea793e6d0a07795860811c1e8b49547610723b051566d4	local_post416i_candidate
linear_pca10_summary.tsv	present	downloads/linear_pca10_summary.tsv	2461	cbf70a872cd2b779912a9667dca5db1ecfae1a60e45c0bf82119275e246f3441	local_post416i_candidate
linear_pca10_vs_ridge_v1.tsv	present	downloads/linear_pca10_vs_ridge_v1.tsv	2456	efe1d22f0e65d6eba2daf8156e94e5652a17c03d39f51242b33bd19de51c4b07	local_post416i_candidate
muscle_context_summary.tsv	present	downloads/muscle_context_summary.tsv	301	2f5beac749dfb2525ee63c994457b03ae02067c100ee475ebbc71e050f290510	local_post416i_candidate
muscle_target_coverage.tsv	present	downloads/muscle_target_coverage.tsv	704	43331bcc81f377391515decfaae2753da9b210dcc16e62f3d7305a1cdb7e5a70	local_post416i_candidate
nar_public_resource_gap_matrix_20260710.tsv	present	downloads/nar_public_resource_gap_matrix_20260710.tsv	4711	9b45e43df7ff4de476a2a03dcc46958b902920d483beb70fdafec061eef410a4	local_post416i_candidate
nmd_support_score_components.tsv	present	downloads/nmd_support_score_components.tsv	5406	00fef5f6daa3f85a80e61436ff34666d9b4b85c63bca7d6967754d0bffc1a61e	local_post416i_candidate
nmd_vcell_data_dictionary_v0.5.0.tsv	present	downloads/nmd_vcell_data_dictionary_v0.5.0.tsv	124931	9adcca0ec3d1c1e6f028931f051ee0fc8bcb430323812e001177c7bcd350de8e	local_post416i_candidate
nmd_vcell_data_dictionary_v0.7.0-v22.tsv	present	downloads/nmd_vcell_data_dictionary_v0.7.0-v22.tsv	224563	18f584796549f0845004917da4980d3e24ee174b59d2aaea0c9a4eff1e2eab94	local_post416i_candidate
nmd_vcell_data_dictionary_v0.8.1-v24r1.tsv	present	downloads/nmd_vcell_data_dictionary_v0.8.1-v24r1.tsv	255169	8e2ca8809271edf78a7b265450b2d6e990e6b946be96069ce5f30cddb02e8a6e	local_post416i_candidate
nmd_vcell_database_resource_v0.8.1-v24r1-20260722.tar.gz	source_release_only	downloads/nmd_vcell_database_resource_v0.8.1-v24r1-20260722.tar.gz	9677910	b88a3b9f1ae44b48d6ea3c2a568626229cc93f94d539b8ea30f55534aae41f36	local_post416i_candidate
nmd_vcell_database_resource_v0.8.1-v24r1-20260722.tar.gz.sha256	present	downloads/nmd_vcell_database_resource_v0.8.1-v24r1-20260722.tar.gz.sha256	123	ecd6bc1e30086ee9abe3b13137cf7c74073a73a114d68647f5df8a4bc54cb124	local_post416i_candidate
nmd_vcell_release_checksums.sha256	present	downloads/nmd_vcell_release_checksums.sha256	16471	98d0ec2db2471e94c975a18c88f950bfe916e1cf4f47f6472c5b35cfd2ac272a	local_post416i_candidate
nmd_vcell_release_checksums_v0.8.1-v24r1.sha256	present	downloads/nmd_vcell_release_checksums_v0.8.1-v24r1.sha256	20585	7bac816a76458e427cc97dfac67a7391dc95c23c644e644d019d303be4b44415	local_post416i_candidate
nmd_vcell_release_manifest.tsv	present	downloads/nmd_vcell_release_manifest.tsv	33741	b521895aff63c5228f859a7dc4f2509f09be30a4810011f57c5d850ca7b0fc29	local_post416i_candidate
noise_ceiling_batch_split.tsv	source_release_only	downloads/noise_ceiling_batch_split.tsv	243939	f5478f2b3554bd478fad38ebe205ce09e95206ceecd078927074686577ab24a2	local_post416i_candidate
noise_ceiling_cell_split_half.tsv	source_release_only	downloads/noise_ceiling_cell_split_half.tsv	1073641	ea6046852a6928114bb09d75f9c7257b4ec7bc37ae87df6d40eef5a6b35704c7	local_post416i_candidate
noise_ceiling_guide_pair.tsv	present	downloads/noise_ceiling_guide_pair.tsv	25732	8dee27aa4ad577cbe56d4b441aa74ec130346dc94ebbc6fec79ba0d6dfc6090c	local_post416i_candidate
noise_ceiling_summary.tsv	present	downloads/noise_ceiling_summary.tsv	543	ef359609505b898ac4352eed87d7bbd00d835e1b7161b81bde4494cbf09111e9	local_post416i_candidate
point_estimate_audit_long.tsv	present	downloads/point_estimate_audit_long.tsv	2467	3c96ebd5b1e8b8d00b490cc5b80c8956d3c0781b9fd1031dd22ad3e89a22c5d1	local_post416i_candidate
point_estimate_audit_summary.tsv	present	downloads/point_estimate_audit_summary.tsv	285	dc6df9726fb7980b24d86629257e46d3bb36efe81abe79359f4dfcb65c5f1399	local_post416i_candidate
post416i_claim_ceiling_resource.tsv	present	downloads/post416i_claim_ceiling_resource.tsv	1493	06467644720aed6018d8c9675c92e4184c26e94d29fa7311d2863586afe6ab6e	local_post416i_candidate
repeated_heldout_gene_gates.tsv	present	downloads/repeated_heldout_gene_gates.tsv	587	0152ce2f094376b980b1b6c5bd6000ed506179837e031f6c87f5a5713f3c0d72	local_post416i_candidate
repeated_heldout_gene_paired_tests.tsv	present	downloads/repeated_heldout_gene_paired_tests.tsv	6385	7f68cc48581996222645667b44dafd3a71f50363b32bb7656dcc8f36ab82c8c1	local_post416i_candidate
repeated_heldout_gene_summary.tsv	present	downloads/repeated_heldout_gene_summary.tsv	2286	91733307e7985b8359bd906e7d961388c92d7045cc186ac39a117eb2ea9a0087	local_post416i_candidate
repeated_ridge_effect_sizes.tsv	present	downloads/repeated_ridge_effect_sizes.tsv	2931	594d99f93355ce7032efa8113e06ed510ac3819f8575caa57dd4a363c007bf6b	local_post416i_candidate
repeated_split_gene_reuse.tsv	present	downloads/repeated_split_gene_reuse.tsv	22050	0e65b0765cf0cd09d9a7a46b86034d875c583f451286ff4bbfb028629fe99ece	local_post416i_candidate
repeated_split_pairwise_overlap.tsv	present	downloads/repeated_split_pairwise_overlap.tsv	1676	ff13d6db603555aa134ab1d981bf98366a0e404eada699cb18ee7f294bab9ca3	local_post416i_candidate
scgpt_and_ridge_same_coverage_scores.tsv	present	downloads/scgpt_and_ridge_same_coverage_scores.tsv	115641	2d0bdc161494059d5f8046db0636bb81adba3574abf3210afb603a3de54f4e92	local_post416i_candidate
scgpt_frozen_split_gates.tsv	present	downloads/scgpt_frozen_split_gates.tsv	762	79b98ed9f2d3e6f9650678025095102dd0b4766734e43107c0ada354ea3698ff	local_post416i_candidate
scgpt_frozen_split_paired_tests.tsv	present	downloads/scgpt_frozen_split_paired_tests.tsv	6606	e4453c8322067ddb3d0107ab5c3b14c4ea25e60b01fe4684cba1f36797d10c14	local_post416i_candidate
scgpt_frozen_split_scores.tsv	present	downloads/scgpt_frozen_split_scores.tsv	57742	3c902fbb990f35bd851abbfee63975603a130a727bf8bc38555bd1f032172581	local_post416i_candidate
scgpt_frozen_split_summary.tsv	present	downloads/scgpt_frozen_split_summary.tsv	2463	d6a72b63c2d2da48a081dbcd6332a78e2453408de4511f203df2231b334bc2fa	local_post416i_candidate
scgpt_vs_ridge_v1.tsv	present	downloads/scgpt_vs_ridge_v1.tsv	2364	9a4835582882ea1776b4fc6190ad2884b9054873370a14e3f09b23419b50ce0b	local_post416i_candidate
signature_summary.tsv	present	downloads/signature_summary.tsv	1104	6e1b8756d4c49763d16acc51373e1084e46ac364960cdbf9a90baf8e19133f86	local_post416i_candidate
source_pairwise_concordance.tsv	present	downloads/source_pairwise_concordance.tsv	2124	4d11035547f9cc9c057238311980f4d145936925088e99075399ac00ff7a9d07	local_post416i_candidate
stage4_16i_gate_summary_for_resource.tsv	present	downloads/stage4_16i_gate_summary_for_resource.tsv	1441	8bab6229fb791efac0f6cb575372bb0378de0c6979ae28125d7da670a236604f	local_post416i_candidate
stage4_16i_negative_endpoint_summary.tsv	present	downloads/stage4_16i_negative_endpoint_summary.tsv	1924	1fbdb6c48f650311e9157ceb2c02850117d18c54a906e5c4e5126cb4894b6b76	local_post416i_candidate
supplementary_figure_s13_sampling_coverage_sensitivity_v21.pdf	present	downloads/supplementary_figure_s13_sampling_coverage_sensitivity_v21.pdf	89179	3e5efacec07f7eba9c328affdefd6edb321a11098dd9ddb4a9c9f5d1b68b5da3	local_post416i_candidate
supplementary_figure_s14_legend_v22.md	present	downloads/supplementary_figure_s14_legend_v22.md	922	6dcbdc451b2c2dd0012a99d38c32fae1aa83b5049769ebba4adba85f63121ac6	local_post416i_candidate
supplementary_figure_s14_repeated_fold_stability_v22.pdf	present	downloads/supplementary_figure_s14_repeated_fold_stability_v22.pdf	49684	af125696220e00deb970e3fb8591623b8dbda9d047c27b98f749f538a1567d66	local_post416i_candidate
supplementary_figure_s14_repeated_fold_stability_v22.svg	present	downloads/supplementary_figure_s14_repeated_fold_stability_v22.svg	54786	fbbe31dbf73c13db2a34a1c2494dada6e80883da8cd634b504d736a1c3788681	local_post416i_candidate
supplementary_s13_panel_a_historical_sampling.tsv	present	downloads/supplementary_s13_panel_a_historical_sampling.tsv	177	63219149a8c05c561f7e92318044008c0dd5fcc589e13643d0131b76a5bdbde6	local_post416i_candidate
supplementary_s13_panel_b_directional_sensitivity.tsv	present	downloads/supplementary_s13_panel_b_directional_sensitivity.tsv	607	7de11f63ece38d378abde5bf3218b21a66556b52ae77b1c69b8916e41f324230	local_post416i_candidate
supplementary_s13_panel_b_fold_counts.tsv	present	downloads/supplementary_s13_panel_b_fold_counts.tsv	51	dd3a130f84ee03477fd721fb0b663990675d66bbaa8d656772f8292190ee15ec	local_post416i_candidate
supplementary_s13_panel_c_coverage_gates.tsv	present	downloads/supplementary_s13_panel_c_coverage_gates.tsv	251	e8fa4d4f521c17651c50c69585c6649e4eae280d5169a138e1e31b2805c07582	local_post416i_candidate
supplementary_s13_panel_d_pre_model_selection.tsv	present	downloads/supplementary_s13_panel_d_pre_model_selection.tsv	3935	7284faeee5d03d6dc66c75d2ff955b6460b4cc69efc1efb9398977df1d4d7910	local_post416i_candidate
supplementary_s13_panel_e_reliability_trends.tsv	present	downloads/supplementary_s13_panel_e_reliability_trends.tsv	3925	004db29c7954be82fea2a390a36a82ceedb516c0bc8fd6b996117b80597010cc	local_post416i_candidate
supplementary_s13_panel_f_target_level_effects.tsv	source_release_only	downloads/supplementary_s13_panel_f_target_level_effects.tsv	220058	ef38eb8c5c714afb17e79c22cc408d1247d592386b74dccdfd98ae5c1f636646	local_post416i_candidate
target_measurement_reliability.tsv	source_release_only	downloads/target_measurement_reliability.tsv	401654	87ec00805b65397e1c4b4ccbf86260c72c7f43894ffd87e04fbd3c3a56ad317d	local_post416i_candidate
tier_multiverse_summary.tsv	present	downloads/tier_multiverse_summary.tsv	2928	60cc4b12e90e926cab5505b4664b49f5b92b5127ab889ddbf17717403ac9598a	local_post416i_candidate
v21_coverage_gates.tsv	present	downloads/v21_coverage_gates.tsv	254	934d3e4822b4c6c79f9707052ce10717fea22d512698e28dedb8c3018636f99a	local_post416i_candidate
v21_coverage_logistic_coefficients.tsv	present	downloads/v21_coverage_logistic_coefficients.tsv	2110	218a0ae85b93006942c4889ef432296e5529fcf093a0e9941665e9159a9aa43d	local_post416i_candidate
v21_coverage_summary.tsv	present	downloads/v21_coverage_summary.tsv	7296	ec16148158993dea4182f8f40c8db989de843c903f8913dc43f141d156e29c34	local_post416i_candidate
v21_coverage_target_universe.tsv	source_release_only	downloads/v21_coverage_target_universe.tsv	607362	bb7f5b9444debbd34781c6005cdb51dc127c6a0b3bace78c3a4bb82da8faa2b4	local_post416i_candidate
v21_h1_h2_verification.tsv	present	downloads/v21_h1_h2_verification.tsv	5527	e9ec30e2260e5ade657a0a19cbb8df13378a465f20df7a35bd2291518d5fb8b2	local_post416i_candidate
v21_h3_h4_verification.tsv	present	downloads/v21_h3_h4_verification.tsv	19776	a9410ef13bb88de77bb229eda673bd63392bde4e50b2b81d013798f8ce084009	local_post416i_candidate
v21_historical_aggregate_gates.tsv	present	downloads/v21_historical_aggregate_gates.tsv	369	be60af0271a9cd67e2a743a9198cf6de9711cfc02a43aaf1a90673161531025f	local_post416i_candidate
v21_historical_aggregate_summary.tsv	present	downloads/v21_historical_aggregate_summary.tsv	369	e8b83ec32fb28536622dda0c8d37d4274e0e6301375698a6f277e9f853d0ac1c	local_post416i_candidate
v21_historical_aggregate_tests.tsv	present	downloads/v21_historical_aggregate_tests.tsv	857	9c2500603a6a54c2174cfe1f3af38161c63b27c5f3a6d34799ea525c5b51660d	local_post416i_candidate
v21_historical_target_coverage.tsv	present	downloads/v21_historical_target_coverage.tsv	62744	51b5e6d2cd390b9f328ac2918021170eba58bb24ad14f4e3b3ac01d3d458694b	local_post416i_candidate
v21_historical_target_scores.tsv	source_release_only	downloads/v21_historical_target_scores.tsv	324739	919093def2ea1bfce0231d1988e535389fdd17e5b7b013e30d00301e273e1e1b	local_post416i_candidate
v21_primary_feature_provenance.tsv	present	downloads/v21_primary_feature_provenance.tsv	5574	f6f17c9e092232a191ca42dead31ba0076fcf65c70ecaf997090c60c6a5ec667	local_post416i_candidate
v21_primary_inner_cv.tsv	present	downloads/v21_primary_inner_cv.tsv	1991	a0b757213573b25f41d1cf9b5689b86c979ef35455129b2fac0ed614a09635bf	local_post416i_candidate
v21_primary_model_gates.tsv	present	downloads/v21_primary_model_gates.tsv	599	39a9d7b4cead53ec7d58fa8cddc8d668dec70d52add98767496a0d191af93b2a	local_post416i_candidate
v21_primary_model_summary.tsv	present	downloads/v21_primary_model_summary.tsv	1119	269bb2f8904716089ed018c120ed2f1ba4b11888acd7264fe7a6d8ac7526bfbd	local_post416i_candidate
v21_primary_outer_folds.tsv	present	downloads/v21_primary_outer_folds.tsv	78317	b8f1bf572a889ccd053734d064f25af401c2fe3cf50cf3c6baa596d04ed776c2	local_post416i_candidate
v21_primary_target_scores.tsv	present	downloads/v21_primary_target_scores.tsv	1847174	02ef6145b6ebcd840707b86989e3da86559e8b0dec956871c7172bb31662ea5d	local_post416i_candidate
v21_primary_tests.tsv	present	downloads/v21_primary_tests.tsv	3077	e21b4b83588c4792f7c0ff2fa8094ee83dda253502ae5c1474e4581b9c21dfcf	local_post416i_candidate
v21_reliability_assignments.tsv	present	downloads/v21_reliability_assignments.tsv	205840	29e07dd651ae6d33fb318faff0d224d6bd9588e9e9288e22215d2697ed736201	local_post416i_candidate
v21_reliability_cutpoints.tsv	present	downloads/v21_reliability_cutpoints.tsv	623	82b6beb48ec1aef574e6b68562fcd3dcf0c6e526c2b02d7d606d1da609f4baf6	local_post416i_candidate
v21_reliability_effect_targets.tsv	source_release_only	downloads/v21_reliability_effect_targets.tsv	795848	eaec44e0104a728696a4fcb7a02887445d3bc1374d7d2fbc91d10e4eaf0e9e3f	local_post416i_candidate
v21_reliability_gates.tsv	present	downloads/v21_reliability_gates.tsv	854	c902708ee4c80676a4e8ff638055817874e9ae0f712bc362768390f689658d8c	local_post416i_candidate
v21_reliability_stratified_effects.tsv	present	downloads/v21_reliability_stratified_effects.tsv	12222	782e4ebaf4102ecbdc080b0e4ea3df70d142fc63e9eb04757342fcc2ebc5de8c	local_post416i_candidate
v21_reliability_trends.tsv	present	downloads/v21_reliability_trends.tsv	4073	6bcb173d46eadec5ca98ea47d32370aa7344f1ca03e2c3a69ff173d132708f70	local_post416i_candidate
v21_unbalanced_model_summary.tsv	present	downloads/v21_unbalanced_model_summary.tsv	1128	01a55db9529184e47a27242e09b8d2caf8ef31bec8f561b0fb6c8163d804114e	local_post416i_candidate
v21_unbalanced_outer_folds.tsv	present	downloads/v21_unbalanced_outer_folds.tsv	78317	12201365dd5e6579ca6b411c280aa976007fb726e6b89a4d37f36145c49ea912	local_post416i_candidate
v21_unbalanced_tests.tsv	present	downloads/v21_unbalanced_tests.tsv	3095	fc8c60f2d9b182e4e470fbbac42432d149a148f9c5ae74b5d1d6f696b72fcfac	local_post416i_candidate
v22_repeat_fold_assignment_pairwise.tsv	present	downloads/v22_repeat_fold_assignment_pairwise.tsv	12340	7e14d22a7c489ddcdd6955ef2a8bd42d277a41f99ae1b41242dc7c0f35b75f19	local_post416i_candidate
v22_repeat_fold_counts.tsv	present	downloads/v22_repeat_fold_counts.tsv	1526	7be9607f9545edfe0913309f6f469eb0738c491396f0701e466467d3f42e43e8	local_post416i_candidate
v22_repeat_independent_verification.tsv	present	downloads/v22_repeat_independent_verification.tsv	12768	353c16a047a5b1677f1442d4f56c53c3f63278180c44553de498bdc3f034c09e	local_post416i_candidate
v22_repeat_joint_uncertainty.tsv	present	downloads/v22_repeat_joint_uncertainty.tsv	771	376affea67bb1342a98d8724ada0dcb25089aa49657384454adfd2d5bc16e261	local_post416i_candidate
v22_repeat_metric_distributions.tsv	present	downloads/v22_repeat_metric_distributions.tsv	3225	45b73a81fec717d19f3657c0c5f1cad403b977f74b698cce2890b02430cf78a2	local_post416i_candidate
v22_repeat_model_summaries.tsv	present	downloads/v22_repeat_model_summaries.tsv	19452	67f074ea6af37f197fd0aa88d6a4ef1b14bace527ca7ec6e9ba67c3982527a6b	local_post416i_candidate
v22_repeat_primary_metrics.tsv	present	downloads/v22_repeat_primary_metrics.tsv	6156	f10d00ac433a82f862b5f16f658c0a477beb8646c567f2d6f3743eb7a5a7c1f0	local_post416i_candidate
v22_repeat_selected_alphas.tsv	present	downloads/v22_repeat_selected_alphas.tsv	1831	560642228a9d7096bbee49f44c17ddac0a956de76b4691b03727fe454625b8a8	local_post416i_candidate
v22_repeat_stability_gates.tsv	present	downloads/v22_repeat_stability_gates.tsv	489	1210337e051f88bd6e463501102150e83cae12cae155a02c7197481e76ab59e2	local_post416i_candidate
v22_repeat_target_effect_stability.tsv	source_release_only	downloads/v22_repeat_target_effect_stability.tsv	751296	9d701b25ad68d3ba21e1e5ce72597aec222901430f195d969f76e29d310421ca	local_post416i_candidate
v24_candidate_all_genes_splitpipe112.tsv	present	downloads/v24_candidate_all_genes_splitpipe112.tsv	8910907	2a144c39adb157c33ad753b9329fea4e6fc2b16a75864339dfb3ad8198eabcdf	local_post416i_candidate
v24_gene_column_exceptions.tsv	present	downloads/v24_gene_column_exceptions.tsv	333	ec258ebb7ac9bae8e4b4860b8728d41b70632a52e4b57da0ed4aed2d03c002d8	local_post416i_candidate
v24_gene_column_identity_gates.tsv	present	downloads/v24_gene_column_identity_gates.tsv	1227	3a225d91c498b43f8f7659a9a1bc4620e3f4cf7aa1c6a65baa01918e7fdad834	local_post416i_candidate
v24_gene_column_identity_summary.json	present	downloads/v24_gene_column_identity_summary.json	2500	2d2cc1ea68db2890cc026174d490090ebee3e8e2559d88c1aec452da200cbd89	local_post416i_candidate
v24_gene_column_identity_verification_checks.tsv	present	downloads/v24_gene_column_identity_verification_checks.tsv	1035	5aa4a11f500e1b77c0967becd67ad7fab1c82d7d0ded1bcc44db6921778d7c4c	local_post416i_candidate
v24_gene_column_identity_verification_summary.json	present	downloads/v24_gene_column_identity_verification_summary.json	301	eb846cd34424362a0cbffe506ef779a59244395b95acccef46003051009f7a7d	local_post416i_candidate
v24_gene_column_source_assertions.tsv	present	downloads/v24_gene_column_source_assertions.tsv	2393	4e1746715d8f930cba3875e2445ac14b9ea53abecedfaecbce5414cca052aabe	local_post416i_candidate
v24_gene_column_source_manifest.tsv	present	downloads/v24_gene_column_source_manifest.tsv	4083	9422edbdd2b05b967ac37d930061e5dd9a1ca9c187e5d97c3ddb674c0ddf3fe2	local_post416i_candidate
v24_guide_added_public_sequence_counts.tsv	present	downloads/v24_guide_added_public_sequence_counts.tsv	128378	3f2c60b7cf7893c41101c22ca54b924dc331edda82efe093d83681703dee1640	local_post416i_candidate
v24_guide_candidate_sequence_count_conservation.tsv	present	downloads/v24_guide_candidate_sequence_count_conservation.tsv	49076	21aea3193d23fa92186b1e0da35b7d2648c302f0e71c3eefbf688e6a5e524f57	local_post416i_candidate
v24_guide_paired_run_reference_deltas.tsv	present	downloads/v24_guide_paired_run_reference_deltas.tsv	2243	8b51bf3ccab68132c73b42c2170f82364619f042c261075be0d30561724d9a0c	local_post416i_candidate
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v24_matrix_column_62711_observation.tsv	present	downloads/v24_matrix_column_62711_observation.tsv	409	96d3bebb226aabd8b1746961d5d1d8cb9304df429d1086df3058e1e12e8bed45	local_post416i_candidate
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external_candidate_evidence_data_dictionary.tsv	present	downloads/external_candidate_evidence_data_dictionary.tsv	5432	8a917e83aeab13e8dd9fabbb2e3f399b1d681b4566538a0918845180640f8250	results/candidate_external_evidence_import_v01
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gfod2_exclusion_module_block_uncertainty.tsv	present_sensitivity_addendum	downloads/gfod2_exclusion_module_block_uncertainty.tsv	1827	1fa57cb253cf1b61e8095bfd026d48dbac3a0071aa461773fc455876eaaa873c	results/gfod2_exclusion_sensitivity_v01
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CLAIM_BOUNDARY_AND_TRACE.tsv	source_release_only	downloads/adam10-design-sensitivity-v087/audit/CLAIM_BOUNDARY_AND_TRACE.tsv	1178	43753981cd4520dbde0ee8ca952f5a4d5df62ffb984ee1136615b95a3caeac4a	curated_v08_7_design_sensitivity_addendum/CLAIM_BOUNDARY_AND_TRACE.tsv
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MANUSCRIPT_CHANGE_LEDGER.tsv	source_release_only	downloads/adam10-design-sensitivity-v087/audit/MANUSCRIPT_CHANGE_LEDGER.tsv	526	11032d69c192028d35d7dd252c9af89ac1d0a1b490ea8b99a15b59ef947af0e5	curated_v08_7_design_sensitivity_addendum/MANUSCRIPT_CHANGE_LEDGER.tsv
SUPPLEMENTARY_TABLE_INDEX_V087.tsv	source_release_only	downloads/adam10-design-sensitivity-v087/audit/SUPPLEMENTARY_TABLE_INDEX_V087.tsv	356	b12a89b89bfbf1d2db5cf224ffbd990a917b5b03b55bd07249f2457512ecc35e	curated_v08_7_design_sensitivity_addendum/SUPPLEMENTARY_TABLE_INDEX_V087.tsv
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Figure_S32_600dpi.tiff	source_release_only	downloads/adam10-design-sensitivity-v087/figures/Figure_S32_600dpi.tiff	1345692	53f23fa50c5592cf7ee7bafa56246688a86b3660fcfa725d2f8eda4b7751cfb8	curated_v08_7_design_sensitivity_addendum/supplementary_figures/Figure_S32_600dpi.tiff
design_sensitivity_addendum_v08_7.docx	source_release_only	downloads/adam10-design-sensitivity-v087/manuscript/design_sensitivity_addendum_v08_7.docx	505099	d8c6fed8a47f26c77c9092ee2efc6dedbad07912dbaf6c67d533fba99fee7396	curated_v08_7_design_sensitivity_addendum/documents/NMD_VCell_v08_7_Design_Sensitivity_Addendum.docx
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manuscript_v08_7.docx	source_release_only	downloads/adam10-design-sensitivity-v087/manuscript/manuscript_v08_7.docx	37307	983b7437a95579cbfb24978f440b5996783bd5975ee77cc2d1af8cb002204498	curated_v08_7_design_sensitivity_addendum/documents/NMD_VCell_NAR_Manuscript_curated_v08_7_DESIGN_SENSITIVITY.docx
manuscript_v08_7.md	source_release_only	downloads/adam10-design-sensitivity-v087/manuscript/manuscript_v08_7.md	58216	d13afc8a49a1624fd76e24de8f24f9182eed7df711b8ad418f685c80df78c973	curated_v08_7_design_sensitivity_addendum/NMD_VCell_NAR_Manuscript_curated_v08_7_DESIGN_SENSITIVITY.md
manuscript_v08_7.pdf	source_release_only	downloads/adam10-design-sensitivity-v087/manuscript/manuscript_v08_7.pdf	137376	7ac32b16555def658d2eed94550c89d0c0340ef0cee1fdc3836c037e732d1279	curated_v08_7_design_sensitivity_addendum/documents/NMD_VCell_NAR_Manuscript_curated_v08_7_DESIGN_SENSITIVITY.pdf
supplement_v08_7.md	source_release_only	downloads/adam10-design-sensitivity-v087/manuscript/supplement_v08_7.md	20828	ff5a4982a799507e889c40f414fed70e085e9d37ebb2b4c21ff68dbbf0f834ed	curated_v08_7_design_sensitivity_addendum/NMD_VCell_NAR_Supplement_curated_v08_7_DESIGN_SENSITIVITY.md
supplement_v08_7.pdf	source_release_only	downloads/adam10-design-sensitivity-v087/manuscript/supplement_v08_7.pdf	13992298	50076d152d917feb10f0735b8790279a26e287b0c369fdb74097552801c6bea4	curated_v08_7_design_sensitivity_addendum/documents/NMD_VCell_NAR_Supplement_curated_v08_7_DESIGN_SENSITIVITY.pdf
adam10_formal_parameter_lock_template_v088.json	source_release_only	downloads/adam10-design-sensitivity-v087/parameter_lock/adam10_formal_parameter_lock_template_v088.json	2203	6f5df6c2177c24fcf06ac435116fdd0cb8f6540667ac21c44417a237d04b4dd2	curated_v08_7_design_sensitivity_addendum/adam10_formal_parameter_lock_template_v088.json
adam10_operating_characteristics_sensitivity_v087.json	source_release_only	downloads/adam10-design-sensitivity-v087/reproducibility/adam10_operating_characteristics_sensitivity_v087.json	2768	d7db37ecf4132573bf2c5bfd346ae11a09444f9bf1251b243a1e7da705cd9b3f	config/adam10_operating_characteristics_sensitivity_v087.json
server_reproducibility_public_receipt.json	source_release_only	downloads/adam10-design-sensitivity-v087/reproducibility/server_reproducibility_public_receipt.json	1015	b5fa155ecabe9e9e86f8e2ede124c3cd21d3a1496bded64e5bf0563a194cc055	results/adam10_operating_characteristics_v087/SERVER_REPRODUCIBILITY_RECEIPT.json (public-safe projection)
simulate_adam10_operating_characteristics_v087.py	source_release_only	downloads/adam10-design-sensitivity-v087/reproducibility/simulate_adam10_operating_characteristics_v087.py	19226	543e68bb859ecc0829cfafedab7a601c82fd77f7304de078ccb9573700718d9b	scripts/simulate_adam10_operating_characteristics_v087.py
simulation_manifest_v087.json	source_release_only	downloads/adam10-design-sensitivity-v087/reproducibility/simulation_manifest_v087.json	1914	41d6add980e97c58046cece08fe53dd197a5d98407a3bc687cdcf2cc9fb3eeaa	results/adam10_operating_characteristics_v087/manifest.json
simulation_report_v087.md	source_release_only	downloads/adam10-design-sensitivity-v087/reproducibility/simulation_report_v087.md	2227	887bab7f1042472d2922bb96756ca4999431d17c7c186b75f429128a1985abeb	results/adam10_operating_characteristics_v087/ADAM10_OPERATING_CHARACTERISTICS_SENSITIVITY_V087.md
validate_adam10_design_sensitivity_addendum_v087.py	source_release_only	downloads/adam10-design-sensitivity-v087/reproducibility/validate_adam10_design_sensitivity_addendum_v087.py	7174	9d6fa45a29e3e54ff177364eb7ead6f1bb042ce9a92f4efd58f3f55e5ddc392b	scripts/validate_adam10_design_sensitivity_addendum_v087.py
validate_adam10_formal_parameter_lock_v088.py	source_release_only	downloads/adam10-design-sensitivity-v087/reproducibility/validate_adam10_formal_parameter_lock_v088.py	4140	82f1abf2efd57aa09fbfcadf4b4b12db4c960664a5131340dcf1cdc70bc2a0b5	scripts/validate_adam10_formal_parameter_lock_v088.py
validate_adam10_operating_characteristics_v087.py	source_release_only	downloads/adam10-design-sensitivity-v087/reproducibility/validate_adam10_operating_characteristics_v087.py	4152	f8b1774d984ec9c8135bcab90d2ed3f9da5dca0415caa0cd872544f16a4c4806	scripts/validate_adam10_operating_characteristics_v087.py
Figure_S32_source_data.tsv	source_release_only	downloads/adam10-design-sensitivity-v087/source_data/Figure_S32_source_data.tsv	11452	11be6a11cf013d556a97030fc9b287958f5f30e86f49771ffb78297fc1a5e3f7	curated_v08_7_design_sensitivity_addendum/source_data/Figure_S32_source_data.tsv
Table_S65_full_grid_v087.tsv	source_release_only	downloads/adam10-design-sensitivity-v087/tables/Table_S65_full_grid_v087.tsv	128492	4657b237891047c75f4b982b7973db15a467f41e5d877bf296d87ab1c2753a1c	curated_v08_7_design_sensitivity_addendum/supplementary_tables/Table_S65_adam10_operating_characteristics_full_grid_v087.tsv
Table_S66_reference_v087.tsv	source_release_only	downloads/adam10-design-sensitivity-v087/tables/Table_S66_reference_v087.tsv	928	01402fa41b168e81c613777e8bac47693470987de4e78ffe197ab653279a5e0f	curated_v08_7_design_sensitivity_addendum/supplementary_tables/Table_S66_adam10_operating_characteristics_reference_v087.tsv
manifest.json	source_release_only	downloads/adam10-design-sensitivity-v087/manifest.json	9183	264657224dd2bc8e96bb8168a3f8d7a7d85d44aef58852fc79d2c8c6f00535b3	generated cross-surface manifest
SHA256SUMS.txt	source_release_only	downloads/adam10-design-sensitivity-v087/SHA256SUMS.txt	3296	a5d90c2db79890fe17c2334ea6b1ff6c335890225f3e361c06016a57b5b2d3b4	generated checksum index
CROSS_SURFACE_SYNC_RECEIPT.json	source_release_only	downloads/adam10-design-sensitivity-v087/CROSS_SURFACE_SYNC_RECEIPT.json	1302	d3e8f4f43e82fd149b543e0b8f9aa9bb68865c4a606be2380566db36cfed4399	generated cross-surface sync receipt
nmd_vcell_adam10_design_sensitivity_v087_20260906.zip	source_release_only	downloads/nmd_vcell_adam10_design_sensitivity_v087_20260906.zip	15813498	19bb29cded2e6b4551080efd48946a79e208908a76f1607dcdf60155fa68ab3e	generated deterministic cross-surface packet
