{
  "run_schema": "nmd-vcell-model-run/1.0",
  "interface_build": "EA-20260817-57",
  "resource_release": "v1.2.0-measured-dmd-evidence",
  "evidence_freeze": "2026-08-03",
  "run_id": "MRUN-SCGPT-0.2.5-FIVE-SEED-20260714",
  "model_id": "EXTERNAL-SCGPT-0.2.5",
  "model_name": "scGPT",
  "model_version": "0.2.5",
  "run_role": "OFFICIAL_NEGATIVE_CONTROL",
  "execution_status": "COMPLETED",
  "decision_state": "OFFICIAL_NEGATIVE_CONTROL",
  "completed_at": "2026-07-14",
  "completion_date_status": "FROZEN_COMPLETION_NOTE",
  "biological_context": "Processed HepG2 CRISPRi perturbation-response substrate with checkpoint-supported gene coverage",
  "task_id": "G0",
  "data_release": "NMDVCELL-HEPG2-CRISPRI",
  "split_id": "five-frozen-checkpoint-supported-splits-20260712-20260716",
  "seeds": [
    "20260712",
    "20260713",
    "20260714",
    "20260715",
    "20260716"
  ],
  "seed_status": "COMPLETE",
  "provenance": {
    "code_revision": null,
    "code_revision_status": "VERSION_RECORDED_COMMIT_NOT_IN_COMPLETION_NOTE",
    "container_digest": null,
    "container_digest_status": "NOT_RECORDED_IN_COMPLETION_NOTE",
    "data_digests": [],
    "runtime": "PyTorch 2.5.1+cu121; NVIDIA V100 32GB; 15 epochs per seed",
    "source_report_path": "reports/OFFICIAL_SCGPT_COMPLETION_20260714.md",
    "source_report_sha256": "2e5f01b877552572981d34aef2b0ccc0c45be8928c4b61dffe126b66eb69f3db"
  },
  "metrics": {
    "checkpoint_supported_test_gene_counts": [
      63,
      67,
      55,
      62,
      46
    ]
  },
  "baseline_comparison": "Failed paired RMSE and raw directional support in all five splits; RMSE was higher than same-coverage ridge in every split.",
  "gate": {
    "decision": "FAIL",
    "reason": "The completed checkpoint-supported run did not support foundation-model superiority.",
    "next_action": "Retain as an official negative control with its restricted coverage visible."
  },
  "verification": "Five-seed completion note and released per-seed summary, gates and same-coverage comparison.",
  "source_artifacts": [
    "/resource/api/v1/official_scgpt_summary.json",
    "/resource/api/v1/official_scgpt_gates.json",
    "/resource/api/v1/official_scgpt_vs_ridge.json"
  ],
  "promoted_to_current_model": false,
  "claim_boundary": {
    "calibrated_dmd_prediction": false,
    "dmd_disease_response_prediction": false,
    "therapeutic_or_clinical_use": false
  },
  "stable_url": "/resource/model-run/mrun-scgpt-0-2-5-five-seed-20260714/",
  "json_url": "/resource/api/v1.1/model-runs/mrun-scgpt-0-2-5-five-seed-20260714.json"
}